- PYMOL TUTORIAL COMMAND LINE INSTALL
- PYMOL TUTORIAL COMMAND LINE ARCHIVE
- PYMOL TUTORIAL COMMAND LINE PC
PYMOL TUTORIAL COMMAND LINE INSTALL
Python setup.py build install -home=$prefix -install-lib=$modules -install-scripts=$prefixĦ – Normally, you will have a pymol executable into ~/Software/Pymol.
Prefix=~/Softwares/Pymol& lt br /& gt < br />Mkdir -p ~/Softwares/Pymol/& lt br /& gt < br />
Tar -xvf pymol_2& lt br /& gt < br />
ģ – Prepare your installation folder (for me : ~/Softwares/Pymol/) but you can change it. Wget -O pymol_2& lt br /& gt < br />
Sudo apt-get install python python-dev python-pmw python-numpy freeglut3-dev libglew-dev libpng12-dev libfreetype6-dev build-essential libxml++2.6-devĢ – Download Pymol source and extract it: If not, you still can ask you admin to install it.ġ – Firstable: you need python, python-dev, python-pmw, numpy, freeglut3-dev, libglew-dev, libpng, libfreetype and to avoid to have issues during the compilation, install the build-essential package: Good news for non root user! Most of packages needed for PyMOL compilation are usually already installed on Linux session. But I hope try to simplify it for you :).
On linux, the installation is a little harder…. To do : just remplace " C:/Python27 " (without quote) by your current python directory (like " D:/softwares/python27 "). If you have not installed python in this directory (the default one), you have to modify the script "install_pymol.bat". If you have this error and python is installed in this directory, you can use this new script and it will work! In this case, I created 2 other archives with the default python path (" C:/Python27 "). If Python was not installed properly maybe the location in the registry will not be the same. My script search the Python Path in the Windows Registry. Some of you have a issue with Python ("Python not found"). NOTE 2 : If you have the error "Python not found" NOTE : the last step of the pymol lib compilation may be long but it's normal!
PYMOL TUTORIAL COMMAND LINE ARCHIVE
It's not user friendly, so I made an archive with all the files and a batch script to install it automatically. You will need the precompiled version of pymol made by Christoph Gohlke from the Laboratory for Fluorescence Dynamics, University of California.
PYMOL TUTORIAL COMMAND LINE PC
If you want this version you have to downgrade to the 1.7.0.0 or use the linux version, through virtual PC for exemple, or use the 64bit version if your system support it.ĭownload and install Python 2.7.9 (and only python 2.7.9) dx maps) is not working with this version on windows. NOTE : On this version volume renderer (such as. Since Pymol 1.8.0.0 is not available for 32 bits version, I will keep the 1.7.5.0 for 32bits. Now you can launch Pymol from C:/Python27/pymol.exe (default path).If Python is installed on another folder, go to /pymol.exe Run install_pymol.bat and voilà! Press a touch to close the windows All the files needs to be on the same folder. Once you have installed Python, extract all the files from the archive.
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